Furthering research done by Professor Mohammed Poursina, this project simulates RNA folding using a dynamic coarsening algorithm. This project is built on open-source libraries from SimTK.org.
Recent Posts
See AllStill not working
After what I thought was correctly rebuilding SimTK, MolModel and OpenMM from source, things still aren't working. I'm starting to become exasperated. I've made a few posts on the SimTK website, so hopefully they will be able to help me get everything running.
More issues
So it seems I have finally gotten OpenMM to work properly, but I had to do some fishy stuff that might cause problems down the road. But now I find that I need to rebuild SimTK and MolModel from source because the default build is not compatible with a build of OpenMM. So more nonsense before actual work can be done.
Trouble with OpenMM build
In order to utilize OpenMM in my code, I have to build binaries for it from source code. For some reason I'm running into a lot of trouble doing it. This is going to cause some delays. I could use a hand with this if anyone would be willing to help out.
Recent Commits
See AllConfigured to work on my desktop. Environment is now properly configured. Starting work on OpenMM material now.Right now mode...
git-svn-id: http://dynamic-rna-sim.googlecode.com/svn/trunk@23 81255e7c-99dd-b273-ea62-ca3ea99ceb37
git-svn-id: http://dynamic-rna-sim.googlecode.com/svn/trunk@19 81255e7c-99dd-b273-ea62-ca3ea99ceb37
git-svn-id: http://dynamic-rna-sim.googlecode.com/svn/trunk@18 81255e7c-99dd-b273-ea62-ca3ea99ceb37
Most likely final revision for atomistic model.
git-svn-id: http://dynamic-rna-sim.googlecode.com/svn/trunk@17 81255e7c-99dd-b273-ea62-ca3ea99ceb37
misc fiddling about
git-svn-id: http://dynamic-rna-sim.googlecode.com/svn/trunk@16 81255e7c-99dd-b273-ea62-ca3ea99ceb37
